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The von Mises Graphical Model: Regularized Structure and Parameter Learning (CMU-CS-11-129/CMU-CB-11-101)

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posted on 2010-07-01, 00:00 authored by Narges Sharif Razavian, Hetunandan Kamisetty, Christopher J. Langmead

The von Mises distribution is a continuous probability distribution on the circle used in directional statistics. In this paper, we introduce the undirected von Mises Graphical model and present an algorithm for parameter and structure learning using L1 regularization. We show that the learning algorithm is both consistent and statistically efficient. Additionally, we introduce a simple inference algorithm based on Gibbs sampling. We compare the von Mises Graphical Model (VGM) with a Gaussian Graphical Model (GGM) on both synthetic data and on data from protein structures, and demonstrate that the VGM achieves higher accuracy than the GGM.

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Publisher Statement

This is the accepted version of the article which has been published in final form at http://dx.doi.org/10.1002/cyto.a.20933

Date

2010-07-01

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